Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905221.1_cds_XP_016455429.1_49360
CDS Infomation

[gene=LOC107779497] [db_xref=GeneID:107779497] [protein=protease Do-like 9] [protein_id=XP_016455429.1] [location=join(14606..15173,16176..16375,16469..16649,19099..19290,20419..20654,21601..21702,21807..21857,21968..22072,22148..22246)] [gbkey=CDS]
Sequence

ATGGCAGGACGCAAACGAGGAAGAAAGCCCAAATCAGATCCCCTTTCACCAGCAGCAGAC
ATCCCAACATCAACTTCACCCCACATTGACGACGACGTCGTTTTCTCCGTCAGCAACGTT
GAGCTCATCGACCCACCTCCTTCCACTTCCCGTCCCCGCCGTGGTCGGCCCCGCAAAATC
CTTAAATTACCCGAAAACTCTAACCCCCAAAATGGAAAAACCCTAAAAAAAGCAACACGA
CTCGTGATTGATAAACCCAACGGGGTAGGGGTAGGGGTAGCCTCTCTTGAGGGTACTACT
GTAAATAATGCGGATGTTGCTAGGGTGGTGCCGGCGATGGATGCTGTAGTGAAGGTGTTT
TGCGTTCACACAGAACCGAATTATTCACTCCCGTGGCAGCGGAAGCGACAATACAGTTCG
AGCAGTAGTGGATTTGTTATCAAAGGAAGAAGGGTTCTGACAAATGCACACTCTGTGGAG
CATTACACGCAGGTTAAGTTGAAGAAGAGAGGGTCTGATACCAAGTATGTTGCCACTGTG
CTCGCTATTGGAACTGAATGTGATATTGCGTTGCTTGCCGTGGATGATGATGAGTTCTGG
GAGGGGGTCTCAGCTGTAGAATTTGGGGATTTGCCAGCGCTTCAAGATGCTGTGACAGTA
GTAGGTTATCCAATTGGGGGTGACACGATCTCCGTGACCAGTGGTGTTGTTTCACGCATA
GAGATATTATCTTATGTTCATGGGTCTACTGAACTTTTGGGCCTCCAGATCGATGCAGCT
ATAAATTCTGGAAATTCTGGTGGGCCTGCTTTTAATGATAAAGGAAATTGTGTAGGTATC
GCATTTCAGTCCCTTAAACATGAAGATGTGGAGAATATTGGTTATGTCATCCCAACACCT
GTAATCATGCACTTCATTCAGGACTATGAGAAGAATGGAGCATATACCGGGTTTCCCATT
CTTGGGGTTGAGTGGCAGAAGATGGAAAATCCAGATCTTCGGTTATCAATGGGAATGAAA
CCTGACCAGAAAGGTGTCCGTATAAGAAGAATTGACCCTACTGCACCAGAGTCTATGTTG
TTGATGCCATCCGATGTACTCCTAAGCTTTGACGGGGTTGACATTGCCAATGATGGAACA
GTTCCATTTCGGCATGGAGAGCGTATAGGTTTTAGTTATCTTGTATCCCAAAAATATTCC
GGCGACAGTGCTGCAGTTAAAGTTCTTCGTCGTAATTCTGAGATATTAAATTTCAAGATC
AAACTTGCAACTCAGATGAGGCTTGTTCCAGCTCACAACAAGGGGAGACCTCCATCATAT
TATATTGTAGCTGGATTTGTTTTTACCACTGTATCTGTTCCATATCTTCGTTCCGAGTAT
GGAAAGGATTACGAGTATGAAGCTCCTGTAAAGCTGTTGGACAAACTCCTGCATGAATTT
CGACAATCACCCGACGAACAGATTGTTGTGGTTTCTCAGGTGCTTGTTGCTGACATTAAC
ATCGGATATGAGGAAATAGTTAACACTCAGGTTCTTGCTTTTAACGGTAAGCCTGTGAAA
AATTTGAAGAGCTTGGCAAGCATGGTAGAGAACTGCAATGATGAGTTTTTAAAGTTGGAT
TTGGAATATCAGCAGGTGGTAGTCCTTCAGACAAAGACAGCAAAATCTGCGACATCAGAC
ATCCTTACCACACATTGTATTCCTTCTGCCATGTCCGAGGATCTCAGGATGTGA

Peptide Sequence

PEP ID

XP_016455429.1
PEP Infomation

PREDICTED: protease Do-like 9 [Nicotiana tabacum]
Sequence

MAGRKRGRKPKSDPLSPAADIPTSTSPHIDDDVVFSVSNVELIDPPPSTSRPRRGRPRKI
LKLPENSNPQNGKTLKKATRLVIDKPNGVGVGVASLEGTTVNNADVARVVPAMDAVVKVF
CVHTEPNYSLPWQRKRQYSSSSSGFVIKGRRVLTNAHSVEHYTQVKLKKRGSDTKYVATV
LAIGTECDIALLAVDDDEFWEGVSAVEFGDLPALQDAVTVVGYPIGGDTISVTSGVVSRI
EILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDVENIGYVIPTP
VIMHFIQDYEKNGAYTGFPILGVEWQKMENPDLRLSMGMKPDQKGVRIRRIDPTAPESML
LMPSDVLLSFDGVDIANDGTVPFRHGERIGFSYLVSQKYSGDSAAVKVLRRNSEILNFKI
KLATQMRLVPAHNKGRPPSYYIVAGFVFTTVSVPYLRSEYGKDYEYEAPVKLLDKLLHEF
RQSPDEQIVVVSQVLVADINIGYEEIVNTQVLAFNGKPVKNLKSLASMVENCNDEFLKLD
LEYQQVVVLQTKTAKSATSDILTTHCIPSAMSEDLRM

Transcript Sequence

Gene sequence data has not been registered.